How did you purchase this house? Has the sale deed been executed? Does the agreement/sale deed have any embargo on your right to construct an additional floor? If there is no such clause in it then it is your right to construct an additional floor. The decision to seek a stay order from the court against any attempt to stop you from constructing the additional floor is a wise decision.
You are under no obligation to give any donation for ganesha. Tell them to go ahead and file the complaint. Nobody can be forced to give a donation. You can lodge a counter complaint against them for threatening you.